espressopp.interaction.LennardJonesGromacs¶
if \(d^2 > r_1^2\)
\[U = 4 \varepsilon (\frac{sigma^{12}}{d^{12}} - \frac{sigma^6}{d^6}) + (d-r_1)^3 (ljsw3 + ljsw4 (d-r_1) + ljsw5) \]
else
\[U = 4 \varepsilon (\frac{\sigma^{12}}{d^{12}} - \frac{\sigma^6}{d^6})\]
-
espressopp.interaction.
LennardJonesGromacs
(epsilon, sigma, r1, cutoff, shift)¶ Parameters: - epsilon (real) – (default: 1.0)
- sigma (real) – (default: 1.0)
- r1 (real) – (default: 0.0)
- cutoff – (default: infinity)
- shift – (default: “auto”)
-
espressopp.interaction.
VerletListLennardJonesGromacs
(vl)¶ Parameters: vl –
-
espressopp.interaction.VerletListLennardJonesGromacs.
getPotential
(type1, type2)¶ Parameters: - type1 –
- type2 –
Return type:
-
espressopp.interaction.VerletListLennardJonesGromacs.
setPotential
(type1, type2, potential)¶ Parameters: - type1 –
- type2 –
- potential –
-
espressopp.interaction.
CellListLennardJonesGromacs
(stor)¶ Parameters: stor –
-
espressopp.interaction.CellListLennardJonesGromacs.
setPotential
(type1, type2, potential)¶ Parameters: - type1 –
- type2 –
- potential –
-
espressopp.interaction.
FixedPairListLennardJonesGromacs
(system, vl, potential)¶ Parameters: - system –
- vl –
- potential –
-
espressopp.interaction.FixedPairListLennardJonesGromacs.
setPotential
(potential)¶ Parameters: potential –
-
class
espressopp.interaction.LennardJonesGromacs.
LennardJonesGromacs
¶ The LennardJonesGromacs potential.