espressopp.FixedPairListAdress¶
The FixedPairListAdress is the Fixed Pair List to be used for AdResS or H-AdResS simulations. When creating the FixedPairListAdress one has to provide the storage and the tuples. Afterwards the bonds can be added. In the example “bonds” is a python list of the form ( (pid1, pid2), (pid3, pid4), ...) where each inner pair defines a bond between the particles with the given particle ids.
Example - creating the FixedPairListAdress and adding bonds:
>>> ftpl = espressopp.FixedTupleList(system.storage)
>>> fpl = espressopp.FixedPairListAdress(system.storage, ftpl)
>>> fpl.addBonds(bonds)
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espressopp.
FixedPairListAdress
(storage, fixedtupleList)¶ Parameters: - storage –
- fixedtupleList –
-
espressopp.FixedPairListAdress.
add
(pid1, pid2)¶ Parameters: - pid1 –
- pid2 –
Return type:
-
espressopp.FixedPairListAdress.
addBonds
(bondlist)¶ Parameters: bondlist – Return type:
-
espressopp.FixedPairListAdress.
remove
()¶ -
remove the FixedPairListAdress and disconnect
-
espressopp.FixedPairListAdress.
getBonds
()¶ Return type: